mmagnus/rna-tools

You need to install rna-tools (http://rna-tools.readthedocs.io/en/latest/) first.

Draw VARNA-based image of RNA secondary structure

Type:

<pre>[ss:rna]
UUUCUGUAUAAUGCCGAUAAUAAGGUUCGGCAGUUUCUACCAAACAGCCGUAAACUGUUUGACUACAGUAA
((.(((((...((((((.........))))))........(((((((.......)))))))..))))).))
</pre>

Warning

Keep exactly the same syntax as in the example above and below.

The syntax:

<pre>
[ss:/name of your seq/]
/seq/
/ss/
</pre>
# ^ not <pre/> nor <pre>. Keep a new line after this syntax. So don't do:
</pre>
<pre>

but

</pre>

<pre>
# ^ this could be fixed at some point

Warning

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to get a VARNA-drawn image of secondary structure.